The one about clustalw2/phyml's web interfaces and balibase v2 benchmarks for clustalw2... where clustalw2/phyml are versions of the programs modified to analyze codon sequences... is done!
I actually finished it last month (obviously), But just uploaded it to my webpage.
Take a look if you want:
http://www.rikijpn.co.cc/en/clustalw2_phyml_interface.php
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